Package: soilphysics 5.0

Anderson Rodrigo da Silva

soilphysics: Soil Physical Analysis

Basic and model-based soil physical analyses.

Authors:Anderson Rodrigo da Silva [aut, cre], Renato Paiva de Lima [aut]

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soilphysics.pdf |soilphysics.html✨
soilphysics/json (API)
NEWS

# Install 'soilphysics' in R:
install.packages('soilphysics', repos = c('https://arsilva87.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/arsilva87/soilphysics/issues

Datasets:

On CRAN:

58 exports 9 stars 1.52 score 47 dependencies 10 scripts 1.1k downloads

Last updated 2 years agofrom:21d2bc4d89. Checks:OK: 1 ERROR: 1 WARNING: 5. Indexed: yes.

TargetResultDate
Doc / VignettesOKSep 18 2024
R-4.5-winWARNINGSep 18 2024
R-4.5-linuxERRORSep 18 2024
R-4.4-winWARNINGSep 18 2024
R-4.4-macWARNINGSep 18 2024
R-4.3-winWARNINGSep 18 2024
R-4.3-macWARNINGSep 18 2024

Exports:aggreg.stabilityaggreg.stability_Appcompressive_propertiescompressive_properties2compressive_properties3compressive_properties4compressive_properties5criticalmoisturefitbusscherfitlbcfitsoilwaterfitsoilwater_Appfitsoilwater2fitsoilwater3fitsoilwater4fitsoilwater5fun2formgetInitiallbchemchydraulicCutOffhydraulicCutOff2iwcKr_hKr_thetaliquidlimitllwrLLWR_Appllwr_llmprLLWR_LLMPR_AppllwrPTFmaxbulkdensitymaxcurvparticle.sedimentationparticle.sedimentation_AppplotCIsigmaPPredComppsdrr_AppRsqsigmaPsimSigmaPSindexsoilDeformationsoilStrengthsoilStrength2soilStrength3soilStrength4soilStrength5soilwatersoilwater2soilwater3soilwater4soilwater5SSlbcstressTrafficvoidratioWRC_App

Dependencies:base64encbootbslibcachemclicommonmarkcrayondigestdotCall64evaluatefastmapfieldsfontawesomefsgluehighrhtmltoolshtmlwidgetshttpuvjquerylibjsonliteknitrlaterlifecyclemagrittrmapsMASSmemoisemimepromisesR6rappdirsRcpprhandsontablerlangrmarkdownsassshinyshinydashboardsourcetoolsspamtinytexviridisLitewithrxfunxtableyaml

The soilphysics package: an overview

A.R. da Silva and R.P. de Lima

Rendered fromvignette.Rmdusingknitr::rmarkdownon Sep 18 2024.

Last update: 2021-10-13
Started: 2020-06-22

Readme and manuals

Help Manual

Help pageTopics
Soil Physical Analysissoilphysics-package soilphysics
Soil Aggregate-Size Distributionaggreg.stability
A shiny for Soil Aggregate-Size Distributionaggreg.stability_App
Soil Bulk Density Data SetbulkDensity
Soil Compaction Data Setcompaction
Estimation of compressive properties by Defossez et al. (2003)compressive_properties
Estimation of compressive properties by Keller and Arvidsson (2007)compressive_properties2
Estimation of compressive properties by de Lima et al. (2018)compressive_properties3
Estimation of compressive properties by de Lima et al. (2020)compressive_properties4
Estimation of compressive properties by O'Sullivan et al. (1999)compressive_properties5
Critical Moisture and Maximum Bulk Densitycriticalmoisture maxbulkdensity
Self-starting Nls Busscher's (1990) Model for Soil Penetration Resistancefitbusscher
Parameter Estimation of the Load Bearing Capacity Modelfitlbc
Interactive Estimation of van Genuchten's (1980) Model Parametersfitsoilwater
A shiny for fitting soil water retention curvesfitsoilwater_App
Interactive Estimation of the Groenevelt and Grant (2004) Model Parametersfitsoilwater2
Interactive Estimation of the Dexter's (2008) Model Parametersfitsoilwater3
Self-starting Nls Power Models for Soil Water Retentionfitsoilwater4
Interactive Estimation of the Modified van Genuchten's Model Parametersfitsoilwater5
Converting Function to Formulafun2form
Get Initial Parameter Estimates for the Load Bearing Capacity ModelgetInitiallbc
High-Energy-Moisture-Characteristics Aggregate Stabilityhemc
High Energy Moisture Characteristic (HEMC) curve for measuring aggregate stabilityHEMC_App
The matric potential at the point of hydraulic cut-off obtained from DE (Dexter et al., 2008) and GG (Groenevelt & Grant, 2004) water retention curves.hydraulicCutOff
The matric potential at the point of hydraulic cut-off using the point of maximum curvature of DE (Dexter et al. 2008) water retention curve.hydraulicCutOff2
Integral Water Capacity (IWC)iwc
Unsaturated Hydraulic ConductivityKr_h
Unsaturated Hydraulic Conductivity as a function of water contentKr_theta
Soil Liquid Limitliquidlimit
Least Limiting Water Range (LLWR)llwr
A shiny for calculation of the usual least limiting water rangeLLWR_App
Least Limiting Water (LLWR) and Matric Potential Ranges (LLMPR)llwr_llmpr
A shiny for calculation of least limiting water and matric potential ranges of agricultural soils with calculated physical restriction thresholdsLLWR_LLMPR_App
Least Limiting Water Range (LLWR) Using Pedo-Transfer FunctionsllwrPTF
Maximum Curvature Pointmaxcurv
Sedimentation time of soil particles in aqueous mediaparticle.sedimentation
A shiny for time of particle sedimentationparticle.sedimentation_App
Percentile Confidence Intervals for Simulated Preconsolidation StressplotCIsigmaP
A shiny for simulation of soil compactionPredComp
Soil Pore Size Distributionpsd
Equation of capillaryr
A shiny for equation of capillarityr_App
Multiple R-squaredRsq
Preconsolidation StresssigmaP
Simulating Preconsolidation StresssimSigmaP
The S IndexSindex
LLWR Data Setskp1994
Soil Aggregate Size Data SetSoilAggregate
Soil deformation by O'Sullivan and Robertson (1996)soilDeformation
Estimation of precompression stress by Severiano et al. (2013)soilStrength
Estimation of precompression stress by Schjonning and Lamande (2018)soilStrength2
Estimation of precompression stress by Saffih-Hdadi et al. (2009)soilStrength3
Estimation of precompression stress by Lebert and Horn (1991)soilStrength4
Estimation of precompression stress by Imhoff et al. (2004)soilStrength5
Soil Water Retention, based on the van Genuchten's (1980) formulasoilwater
Soil Water Retention, based on the Groenevelt & Grant (2004) formulasoilwater2
Soil Water Retention, based on the Dexter's (2008) formulasoilwater3
Soil Water Retention, based on Power Modelssoilwater4
Soil Water Retention, based on the modified van Genuchten's formulasoilwater5
Self-Starting Nls Load Bearing Capacity ModelSSlbc
Predicting Soil Stress Due to Agricultural TrafficabilitystressTraffic
Void Ratiovoidratio
A shiny to automatically fit the water retention curveWRC_App